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test-6
SciTeX Cloud project with access to 145+ MCP tools.
Platform
You are running inside an Apptainer container on SciTeX Cloud — a browser-based
scientific research platform.
Web App Modules
- Clew - Pipeline DAG Editor (
/clew/) — Pipeline DAG editor: create, chain, and run reproducible computational workflows with status tracking. - Console - Development Environment (
/console/) — Development environment: file browser, terminal (SLURM + Apptainer), code execution, Jupyter notebooks. - Examples - Interactive Demos (
/example/) — Interactive examples demonstrating scitex features (plotting, stats, IO, sessions). - Hub - Project Dashboard (
/hub/) — Project dashboard showing all user projects, activity feed, and quick actions. - Marketplace - Module Catalog (
/marketplace/) — Browse, install, and publish community modules. - Module Maker - Custom Modules (
/modulemaker/) — Create, edit, and manage custom workspace modules. - Scholar - Literature Management (
/scholar/) — Literature management: search papers (CrossRef/OpenAlex/Semantic Scholar), manage bibliography, explore citation graphs, download PDFs. - Tools - Shared Utilities (
/tools/) — Shared utilities and tools for project management. - Visualizer - Data Visualization (
/vis/) — Data visualization and figure management: view plots, manage figure recipes, export publication-ready figures. - Workspace - Unified Layout (
/workspace/) — Unified three-column layout: AI pane | worktree | module content. Modules switch without losing AI/worktree state. - Writer - Scientific Manuscript Editor (
/writer/) — Scientific manuscript editor: LaTeX editing with live preview, figure/table management, bibliography, PDF compilation.
Available Skills & Tools
- Clew - Pipeline DAG Editor: Create and edit pipeline chains, Run pipelines with status tracking, View pipeline statistics and results (tools:
clew_*) - Console - Development Environment: Browse and edit project files, Run terminal commands, Execute Python/Jupyter notebooks (tools:
project_*,introspect_*,template_*) - Examples - Interactive Demos: Run interactive plotting examples, Explore statistics and data analysis demos, Test IO and file format operations
- Hub - Project Dashboard: View all user projects, Activity feed and recent changes, Quick-navigate to any module
- Marketplace - Module Catalog: Browse and search community modules, Install and uninstall modules, Star and review modules
- Module Maker - Custom Modules: Create modules from templates, Edit module source code, Preview and test modules
- Scholar - Literature Management: Search papers by keyword, DOI, or author, Manage bibliography (BibTeX import/export), Explore citation graphs (references and citations) (tools:
crossref_*,scholar_*,openalex_*) - Tools - Shared Utilities: File format converters, Project validators and linters, Utility functions and helpers
- Visualizer - Data Visualization: Create and edit plots via MCP tools, Compose multi-panel figures, Export publication-ready figures (tools:
plt_*) - Workspace - Unified Layout:
- Writer - Scientific Manuscript Editor: Edit LaTeX manuscript sections, Compile manuscript to PDF, Manage figures and tables (tools:
writer_*)
MCP Tool Examples
| Module | Example Tools |
|---|---|
| Clew | clew_run, clew_chain, clew_status |
| Console | project_list_files, project_read_file, introspect_signature |
| Scholar | scholar_search_papers, scholar_fetch_papers, crossref_search |
| Visualizer | plt_plot, plt_compose, plt_crop |
| Writer | writer_compile_manuscript, writer_add_figure, writer_add_bibentry |
MCP Tools
The scitex MCP server provides 145+ tools.
Run agents sync to push this config to your AI coding tool.
Run /mcp in Claude Code to list all available tools.